STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3017HAD superfamily protein involved in Nacetylglucosamine catabolism. (284 aa)    
Predicted Functional Partners:
BF49_3016
Diguanylate phosphodiesterase.
 
     0.850
BF49_2234
COG1896 Predicted hydrolases of HD superfamily.
 
  
 0.752
BF49_0558
SAMdependent methyltransferase 2 in cluster with Hydroxyacylglutathione hydrolase EC 3126.
 
     0.632
BF49_2924
Phosphoserine aminotransferase EC 26152; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
 
  
 0.567
tal
Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.556
BF49_2996
Osmolarity sensor protein EnvZ EC 273.
  
 
   0.550
BF49_0097
FIG00852261 hypothetical protein.
   
    0.544
BF49_1899
Putative transcriptional regulatory protein.
  
     0.539
mtnP
5methylthioadenosine phosphorylase EC 24228; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
    
 0.537
hisS
HistidyltRNA synthetase EC 61121.
 
    0.535
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.