STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3030InterPro IPR000073IPR000379IPR003089 COGs COG0596. (301 aa)    
Predicted Functional Partners:
BF49_3087
Haloacid dehalogenase type II EC 3812.
 
 
 0.951
BF49_0687
Haloacid dehalogenase type II EC 3812.
  
 
 0.923
BF49_1272
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.910
BF49_1867
Aldehyde dehydrogenase EC 1213.
    
 0.910
BF49_3132
Aldehyde dehydrogenase EC 1213; Belongs to the aldehyde dehydrogenase family.
    
 0.910
BF49_6971
Hypothetical protein.
  
 0.821
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.673
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.656
BF49_6759
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.590
BF49_4939
Damino acid dehydrogenase small subunit EC 14991.
 
  
  0.564
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.