STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3043FIG00444791 hypothetical protein. (75 aa)    
Predicted Functional Partners:
BF49_2747
FIG00450386 membrane protein.
  
   
 0.780
BF49_6061
FIG00450516 Zincfinger domain protein.
  
   
 0.757
BF49_2744
Signal transduction histidine kinase.
  
     0.751
BF49_2225
FIG00450267 hypothetical protein.
  
     0.744
BF49_6099
FIG00440034 hypothetical protein.
  
     0.735
BF49_0618
FIG00450081 hypothetical protein.
  
     0.731
BF49_4282
FIG00480696 hypothetical protein.
  
     0.729
BF49_0113
FIG00442128 hypothetical protein.
  
     0.705
BF49_3980
FIG00450046 hypothetical protein.
  
     0.695
BF49_4506
FIG00480737 hypothetical protein.
  
     0.690
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.