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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3060FIG00441555 hypothetical protein. (281 aa)    
Predicted Functional Partners:
BF49_3059
Polymyxin resistance protein ArnC glycosyl transferase EC 24.
 
  
 0.880
BF49_3061
FIG00440614 hypothetical protein.
 
     0.678
BF49_2269
Mll1762 protein.
 
  
 0.623
BF49_3057
ATP phosphoribosyltransferase regulatory subunit EC 24217.
 
     0.621
BF49_3950
FIG00440537 hypothetical protein.
 
  
 0.616
BF49_1624
Bll3066 protein.
 
  
 0.600
BF49_7075
4amino4deoxyLarabinose transferase and related glycosyltransferases of PMT family.
 
  
 0.576
hisG
ATP phosphoribosyltransferase EC 24217; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
       0.561
BF49_5413
Betagalactosidase EC 32123; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.543
BF49_5414
Betagalactosidase EC 32123; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.527
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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