STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3088tRNA proofreading protein STM4549. (155 aa)    
Predicted Functional Partners:
BF49_3089
Adenylate cyclase EC 4611.
       0.717
BF49_3087
Haloacid dehalogenase type II EC 3812.
       0.649
BF49_3086
Alcohol dehydrogenase EC 1111.
  
    0.454
BF49_4507
Flagellar basalbody rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.412
fliE
Flagellar hookbasal body complex protein FliE.
    
   0.412
BF49_4821
Flagellar basalbody rod modification protein FlgD.
    
   0.412
fliE-2
Flagellar hookbasal body complex protein FliE.
    
   0.412
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.