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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3096Flavoprotein WrbA. (199 aa)    
Predicted Functional Partners:
BF49_6468
Multimeric flavodoxin WrbA.
  
  
  0.964
ubiE
Ubiquinonemenaquinone biosynthesis methyltransferase UbiE EC 211; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
BF49_2885
Starvation-inducible DNA-binding protein; Nonspecific DNAbinding protein Dps Ironbinding ferritinlike antioxidant protein Ferroxidase EC 11631; Belongs to the Dps family.
  
  
 0.744
BF49_0486
LysM domain protein.
   
  
 0.624
BF49_1816
FIG00852950 hypothetical protein.
   
  
 0.607
BF49_6786
Sporulation related domain.
   
  
 0.607
BF49_4896
Serine protein kinase prkA protein Ploop containing.
   
    0.601
BF49_3095
DUF209Cupin domain; Belongs to the pirin family.
       0.599
BF49_2098
DnaJclass molecular chaperone CbpA.
   
  
 0.593
BF49_6666
Isochorismatase family.
  
    0.578
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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