STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3103Beta13glucosyltransferase. (328 aa)    
Predicted Functional Partners:
BF49_5239
Putative bifunctional transferasedeacetylase.
 
 0.775
BF49_6587
Probable glycosyl transferase.
 
  
 0.726
BF49_2387
FIG00447151 hypothetical protein.
  
 0.646
BF49_3101
EXOPOLYSACCHARIDE PRODUCTION PROTEIN EXOQ.
 
  
 0.640
BF49_2451
Succinoglycan biosynthesis transport protein.
 
  
 0.639
BF49_2452
Glycosyltransferase.
 
  
 0.628
BF49_2586
Exopolysaccharide production protein Pss.
 
  
 0.625
BF49_4088
Hypothetical protein.
   
 0.589
BF49_5306
TPR repeat.
  
 0.572
BF49_2597
UDPglucose 4epimerase EC 5132; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.570
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.