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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3111Malate dehydrogenase EC 11137; Belongs to the LDH2/MDH2 oxidoreductase family. (350 aa)    
Predicted Functional Partners:
BF49_5845
Fumarate hydratase class I aerobic EC 4212; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.723
BF49_3112
Nitrilotriacetate monooxygenase component A.
       0.705
BF49_3113
5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168 2hydroxyhepta24diene17dioate isomerase EC 533.
  
    0.682
BF49_2830
Biotin carboxylase EC 63414.
   
 
 0.570
uxuA
Mannonate dehydratase EC 4218; Catalyzes the dehydration of D-mannonate.
  
    0.570
fumC
Fumarate hydratase class II EC 4212; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
 0.472
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
     
 0.458
BF49_1509
Sulfopyruvate decarboxylase alpha subunit EC 41179.
    
 0.438
BF49_1838
Sulfopyruvate decarboxylase alpha subunit EC 41179.
    
 0.438
BF49_4847
Sulfopyruvate decarboxylase alpha subunit EC 41179.
    
 0.438
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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