STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_31135carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168 2hydroxyhepta24diene17dioate isomerase EC 533. (261 aa)    
Predicted Functional Partners:
BF49_3112
Nitrilotriacetate monooxygenase component A.
       0.732
BF49_3111
Malate dehydrogenase EC 11137; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.679
hmgA
Homogentisate 12dioxygenase EC 113115; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
 
 0.627
BF49_4863
Fumarylacetoacetase EC 3712.
  
  
 
0.555
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
  
 
 0.549
BF49_5712
Fumarylacetoacetate FAA hydrolase EC 41168.
  
  
 
0.546
BF49_1722
2oxohepta3ene17dioic acid hydratase EC 42.
  
 
 0.529
BF49_3412
2oxohepta3ene17dioic acid hydratase EC 42.
  
 
 0.529
BF49_0224
2keto4pentenoate hydratase EC 42180.
  
 
 0.507
BF49_2647
2keto4pentenoate hydratase EC 42180.
  
 
 0.507
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.