STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3115Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits. (1149 aa)    
Predicted Functional Partners:
BF49_4909
2oxoglutarate oxidoreductase alpha subunit EC 1273.
  
 0.969
BF49_4848
Sulfopyruvate decarboxylase beta subunit EC 41179.
  
 0.952
BF49_4908
2oxoglutarate oxidoreductase beta subunit EC 1273.
  
 0.952
BF49_2624
Tungstencontaining formate dehydrogenase beta subunit.
   
 0.910
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
  
 
 0.898
BF49_0917
NADdependent malic enzyme EC 11138.
    
 0.848
BF49_0621
4Fe4S ferredoxin ironsulfur binding; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.817
BF49_1488
Adenylylsulfate reductase betasubunit EC 18992.
  
 0.817
BF49_1548
NADdependent formate dehydrogenase gamma subunit.
   
 0.809
BF49_6642
NADHubiquinone oxidoreductase chain E EC 1653.
   
 0.809
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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