STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3118Membrane fusion component of tripartite multidrug resistance system. (393 aa)    
Predicted Functional Partners:
BF49_3119
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
  
  0.893
BF49_0149
Multidrug resistance protein B.
 
  
  0.791
BF49_5034
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
  
  0.790
BF49_2125
Inner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily.
 
  
  0.782
BF49_7255
Drug resistance transporter EmrBQacA subfamily; Belongs to the major facilitator superfamily.
 
  
  0.758
BF49_6323
Macrolide export ATPbindingpermease protein MacB EC 363.
 
 0.733
BF49_1172
RND multidrug efflux transporter Acriflavin resistance protein.
 
 0.690
BF49_7190
RND efflux system inner membrane transporter CmeB.
 
 0.688
BF49_4293
RND efflux system inner membrane transporter CmeB.
 
 0.687
BF49_1153
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.658
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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