STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3121Dalanine aminotransferase EC 26121. (286 aa)    
Predicted Functional Partners:
hisC
Biosynthetic Aromatic amino acid aminotransferase beta EC 26157 Histidinolphosphate aminotransferase EC 2619; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
 
 
 0.934
BF49_0998
Alanine racemase EC 5111; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.933
BF49_2793
Proline dehydrogenase EC 15998 Proline oxidase Delta1pyrroline5carboxylate dehydrogenase EC 15112; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 0.927
BF49_2942
Aspartate aminotransferase EC 2611.
  
 
 0.927
hisC-2
Histidinolphosphate aminotransferase EC 2619; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.924
BF49_2984
DalanineDalanine ligase EC 6324; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.913
BF49_5057
DalanineDalanine ligase EC 6324; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.913
BF49_1720
Hypothetical oxidoreductase YbiC homolog; Belongs to the LDH2/MDH2 oxidoreductase family.
   
  0.912
BF49_1774
Malate dehydrogenase EC 11137; Belongs to the LDH2/MDH2 oxidoreductase family.
   
  0.912
BF49_0507
4hydroxyphenylpyruvate dioxygenase EC 1131127.
   
 
 0.904
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.