Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3139Bsl7612 hypothetical protein. (91 aa)    
Predicted Functional Partners:
BF49_3140
Bll7613 hypothetical protein.
 
     0.930
BF49_3141
Transcriptional regulator TetR family.
 
     0.727
BF49_5873
Bsl0098 protein.
  
     0.532
BF49_7210
Interalphatrypsin inhibitor domain protein.
  
     0.511
BF49_2616
Transcriptional regulator TetR family.
 
     0.510
BF49_2618
2acylglycerophosphoethanolamine acyltransferase EC 23140 Acylacylcarrierprotein synthetase EC 62120.
 
     0.459
BF49_3138
Bll7611 hypothetical protein.
       0.438
BF49_5180
FIG00439865 hypothetical protein.
  
     0.431
BF49_3137
Bll7611 hypothetical protein.
       0.425
BF49_0559
FIG00853143 hypothetical protein.
  
     0.415
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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