STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3147Twocomponent response regulator CreC. (528 aa)    
Predicted Functional Partners:
BF49_3146
Twocomponent response regulator.
 
 0.967
BF49_3145
Hypothetical protein contains weak similarity to NADH dehydrogenase I.
 
 
 0.938
BF49_2142
Twocomponent hybrid sensor and regulator.
  
 0.933
BF49_3244
Chemotaxis protein methyltransferase CheR EC 21180.
 
 
 0.760
BF49_3955
DNAbinding response regulator ChvI.
 
 0.749
BF49_2418
Twocomponent response regulator.
 
 0.679
BF49_2939
Translation elongation factor Grelated protein.
   
 
 0.667
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
   
 
 0.667
BF49_1298
Twocomponent response regulator.
 
 0.665
BF49_2876
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
 
 
 0.650
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.