Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BF49_3154Osuccinylbenzoate synthase EC 421113; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (363 aa)    
Predicted Functional Partners:
BF49_5510
2dehydro3deoxyphosphogalactonate aldolase EC 41221 6phospho2dehydro3deoxygalactonate aldolase 2 oxo3deoxygalactonate 6phosphate aldolase Galactonate dehydratase EC 4216; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.773
BF49_5761
Dgalactarate dehydratase EC 42142.
 
  
 0.561
BF49_3153
Adenylate cyclase EC 4611.
       0.515
BF49_2826
2dehydro3deoxygalactonokinase EC 27158.
 
 
 0.503
BF49_3903
Lfuconolactone hydrolase.
 
  
 0.499
BF49_1718
Altronate dehydratase EC 4217.
 
  
 0.494
BF49_5763
Glucarate dehydratase EC 42140.
 
     0.464
BF49_2272
Radical SAM domain protein.
     
  0.455
BF49_5943
Putative 24dihydroxyhept2ene17dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.453
BF49_1887
Catechol 12dioxygenase EC 113111.
  
 
 0.443
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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