Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BF49_3157L2aminothiazoline4carboxylic acid hydrolase EC 352. (161 aa)    
Predicted Functional Partners:
BF49_3156
Hypothetical protein.
       0.773
BF49_6318
Alkyl hydroperoxide reductase subunit Clike protein.
  
    0.767
fur
Ferric uptake regulation protein FUR; Belongs to the Fur family.
  
    0.604
fur-2
Ironresponsive regulator Irr; Belongs to the Fur family.
  
    0.604
BF49_4046
Ironresponsive regulator Irr; Belongs to the Fur family.
  
    0.604
fur-3
Zinc uptake regulation protein ZUR; Belongs to the Fur family.
  
    0.604
BF49_7354
Ferric uptake regulation protein FUR.
  
    0.604
BF49_4910
Glutamate synthase NADPH small chain EC 14113.
   
   0.527
nuoI
NADHubiquinone oxidoreductase chain I EC 1653; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
   0.482
BF49_3155
RidAYER057cUK114 superfamily group 1.
       0.452
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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