STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3159Nformylglutamate deformylase EC 35168. (296 aa)    
Predicted Functional Partners:
BF49_5333
Formiminoglutamic iminohydrolase EC 35313.
 
 
 0.938
hutI
Imidazolonepropionase EC 3527.
  
 
 0.905
hutU
Urocanate hydratase EC 42149; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.582
hutH
Histidine ammonialyase EC 4313.
  
  
 0.564
BF49_5332
Histidine utilization repressor.
  
 
 0.547
BF49_3393
FIG01005162 hypothetical protein; Belongs to the UPF0262 family.
 
     0.545
BF49_1391
Bll2681 protein.
  
 
 0.525
BF49_4333
Adenosine deaminase EC 3544 alternative form.
  
 
 0.525
BF49_5470
Guanine deaminase EC 3543 Hydroxydechloroatrazine ethylaminohydrolase EC 35993.
  
 
 0.525
BF49_0045
COG2740 Predicted nucleicacidbinding protein implicated in transcription termination ribosomal protein L7Ae family protein.
  
     0.519
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.