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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3178Putative stomatinprohibitinfamily membrane protease subunit YbbK. (333 aa)    
Predicted Functional Partners:
BF49_3177
Putative activity regulator of membrane protease YbbK.
 
  
 0.939
ftsH
Cell division protein FtsH EC 3424; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.894
BF49_4269
UPF0301 protein YqgE; Belongs to the UPF0301 (AlgH) family.
  
    0.637
BF49_6096
INTEGRAL MEMBRANE PROTEIN Rhomboid family.
   
 0.634
BF49_4207
Type IIIV secretion system protein TadC associated with Flp pilus assembly.
  
    0.610
BF49_5504
Bll0955 hypothetical protein.
   
    0.565
BF49_0782
Endonuclease.
   
 0.545
BF49_3024
ZINC PROTEASE EC 3499.
  
 0.537
hflX
GTPbinding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
  
 0.520
BF49_5804
Flagellar protein FlgJ peptidoglycan hydrolase EC 321.
   
    0.502
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.