STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3183COGs COG3683. (212 aa)    
Predicted Functional Partners:
BF49_3182
Putative membrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
   
 0.989
BF49_3184
Dipeptidyl carboxypeptidase Dcp EC 34155.
       0.801
BF49_0219
FIG00440699 hypothetical protein.
  
     0.648
BF49_3980
FIG00450046 hypothetical protein.
  
     0.633
BF49_0113
FIG00442128 hypothetical protein.
  
     0.618
BF49_6099
FIG00440034 hypothetical protein.
  
     0.617
BF49_2731
Flagellar protein FliJ.
  
     0.608
BF49_4006
Signal recognition particle GTPase.
  
     0.601
BF49_6061
FIG00450516 Zincfinger domain protein.
  
     0.578
BF49_6908
Invasion protein B involved in pathogenesis.
  
     0.578
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.