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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3194Putative metal chaperone involved in Zn homeostasis GTPase of COG0523 family. (349 aa)    
Predicted Functional Partners:
BF49_3193
Highaffnity carbon uptake protein HatHatR.
 
   
 0.934
BF49_3195
Zinc ABC transporter periplasmicbinding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.913
rpsN
SSU ribosomal protein S14p S29e SSU ribosomal protein S14p S29e zincindependent; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
 
 
 0.833
BF49_3196
Zinc ABC transporter inner membrane permease protein ZnuB.
 
  
 0.753
BF49_3197
Zinc ABC transporter ATPbinding protein ZnuC.
 
   
 0.747
dksA
C4type zinc finger protein DksATraR family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
  
  
 0.715
BF49_3192
Mg2 transport ATPase protein C.
       0.711
rpmB
LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.701
rpmG
LSU ribosomal protein L33p LSU ribosomal protein L33p zincindependent; Belongs to the bacterial ribosomal protein bL33 family.
 
  
 0.647
BF49_3198
Hypothetical protein.
       0.624
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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