Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BF49_3195Zinc ABC transporter periplasmicbinding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family. (287 aa)    
Predicted Functional Partners:
BF49_3196
Zinc ABC transporter inner membrane permease protein ZnuB.
 
 0.999
BF49_3197
Zinc ABC transporter ATPbinding protein ZnuC.
 
 
 0.998
BF49_3194
Putative metal chaperone involved in Zn homeostasis GTPase of COG0523 family.
 
  
 0.894
BF49_3198
Hypothetical protein.
       0.811
rpsN
SSU ribosomal protein S14p S29e SSU ribosomal protein S14p S29e zincindependent; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.795
rpmB
LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.775
BF49_3193
Highaffnity carbon uptake protein HatHatR.
       0.744
BF49_2838
Putative metal chaperone involved in Zn homeostasis GTPase of COG0523 family.
 
  
 0.739
BF49_1436
CobW GTPase involved in cobalt insertion for B12 biosynthesis.
 
  
 0.737
BF49_3200
Bll7773 protein.
       0.684
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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