Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3200Bll7773 protein. (180 aa)    
Predicted Functional Partners:
BF49_3199
Bll7773 protein.
 
    
0.882
BF49_3195
Zinc ABC transporter periplasmicbinding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
       0.684
BF49_3196
Zinc ABC transporter inner membrane permease protein ZnuB.
       0.684
BF49_3197
Zinc ABC transporter ATPbinding protein ZnuC.
       0.684
BF49_3198
Hypothetical protein.
       0.647
BF49_5180
FIG00439865 hypothetical protein.
  
    0.631
BF49_0870
Multicopper oxidase.
  
  
 0.581
BF49_2719
Multicopper oxidase.
  
  
 0.581
BF49_4443
Coppercontaining nitrite reductase EC 1721; Belongs to the multicopper oxidase family.
  
  
 0.581
BF49_6613
Multicopper oxidase.
  
  
 0.581
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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