Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3210LongchainfattyacidCoA ligase EC 6213. (460 aa)    
Predicted Functional Partners:
BF49_3212
FIG01004200 hypothetical protein.
 
  
  0.976
BF49_6971
Hypothetical protein.
  
 0.937
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.883
BF49_3209
3oxoacylacylcarrier protein reductase EC 111100; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.878
BF49_3211
Conserved hypothetical protein putative acyl carrier domain.
  
  0.874
BF49_1742
LongchainfattyacidCoA ligase EC 6213.
  
     0.749
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.748
BF49_3295
LongchainfattyacidCoA ligase EC 6213.
  
     0.735
BF49_4121
BenzoateCoA ligase EC 62125.
  
     0.696
BF49_5949
Acetylcoenzyme A synthetase EC 6211.
  
     0.684
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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