STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3213FIG00440548 hypothetical protein. (223 aa)    
Predicted Functional Partners:
BF49_5160
Tricarboxylate transport membrane protein TctA.
 
 
 0.885
BF49_0679
Tricarboxylate transport membrane protein TctA.
 
 
 0.876
BF49_1641
Tricarboxylate transport membrane protein TctA.
 
 
 0.876
BF49_5636
Tricarboxylate transport membrane protein TctA.
 
 
 0.875
BF49_5360
Putative exported protein.
  
     0.764
BF49_5634
Tricarboxylate transport protein TctC.
  
     0.725
BF49_0681
Tricarboxylate transport protein TctC.
  
     0.715
BF49_5159
Tricarboxylate transport protein TctB.
 
 
 0.696
BF49_3212
FIG01004200 hypothetical protein.
       0.529
BF49_1640
Tricarboxylate transport protein TctB.
  
 
 0.517
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.