STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3218DNAdirected RNA polymerase specialized sigma subunit sigma24like. (268 aa)    
Predicted Functional Partners:
BF49_3244
Chemotaxis protein methyltransferase CheR EC 21180.
  
 0.951
BF49_6381
Chemotaxis protein methyltransferase CheR EC 21180.
 
 
 0.922
BF49_2142
Twocomponent hybrid sensor and regulator.
  
 0.916
BF49_3220
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.898
BF49_4524
FIG01006195 hypothetical protein.
 
   
 0.827
BF49_2091
Chemotaxis protein methyltransferase CheR EC 21180.
 
 
 0.806
BF49_3700
Sensory transduction regulatory protein.
 
   
 0.803
BF49_4679
Response regulator.
 
   
 0.802
BF49_1894
Phytochrome twocomponent sensor histidine kinase EC 273.
 
   
 0.786
BF49_0769
Twocomponent hybrid sensor and regulator.
  
 0.784
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.