STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3221Nitroreductase family protein. (232 aa)    
Predicted Functional Partners:
BF49_3222
AcylCoA dehydrogenase shortchain specific EC 13992.
 
   
 0.603
BF49_5083
ABCtype multidrug transport system permease component.
  
  
 0.570
BF49_5399
ABC transporter permease protein.
  
  
 0.570
BF49_5999
Nitrate ABC transporter permease protein.
  
  
 0.570
BF49_7279
Blr0907 hypothetical protein.
  
  
 0.570
BF49_6483
Abortive infection protein.
  
  
 0.562
BF49_1725
34dihydroxyphenylacetate 23dioxygenase HpaD EC 113112.
 
    0.482
BF49_3223
AcylCoA dehydrogenase shortchain specific EC 13992.
 
   
 0.479
BF49_6349
Biphenyl23diol 12dioxygenase EC 1131139.
 
    0.475
cobT
Nicotinatenucleotidedimethylbenzimidazole phosphoribosyltransferase EC 24221; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.471
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.