Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_3231MethylatedDNAproteincysteine methyltransferase EC 21163. (180 aa)    
Predicted Functional Partners:
BF49_3291
DNA3methyladenine glycosylase II EC 32221.
  
  
 0.545
BF49_3232
Alphabeta hydrolase fold EC 3815.
  
    0.539
BF49_1927
Mlr6608 protein.
  
  
 0.535
BF49_2155
Universal stress protein UspA and related nucleotidebinding proteins.
  
  
 0.535
BF49_5565
Universal stress protein family tandem domain.
  
  
 0.535
BF49_5776
Universal stress protein F.
  
  
 0.535
BF49_7325
DNA polymerase III beta subunit EC 2777; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initia [...]
 
 
 
 0.527
BF49_4928
FIG00801946 hypothetical protein.
  
  
 0.482
queA
SadenosylmethioninetRNA ribosyltransferaseisomerase EC 5; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
 
  
  0.473
BF49_5965
Serinethreonine protein kinase EC 27111.
  
  
 0.447
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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