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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3241Ectoine hydroxylase EC 117. (266 aa)    
Predicted Functional Partners:
BF49_3240
Transcriptional regulator GntR family.
 
     0.607
BF49_3242
Homoserine dehydrogenase EC 1113.
 
     0.583
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.579
BF49_6971
Hypothetical protein.
  
 
 0.528
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
  
 0.527
BF49_1640
Tricarboxylate transport protein TctB.
  
     0.521
BF49_2956
FIG00443316 hypothetical protein.
  
     0.511
BF49_3796
Ferredoxin.
 
     0.474
BF49_0563
Aspartokinase EC 2724; Belongs to the aspartokinase family.
     
 0.451
BF49_1416
Aminotransferase class III.
  
  
 0.432
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.