Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3247TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (362 aa)    
Predicted Functional Partners:
BF49_1294
TRAP dicarboxylate transporter DctM subunit unknown substrate 6.
 
 
 0.906
BF49_1293
TRAP dicarboxylate transporter DctQ subunit unknown substrate 6.
 
 
 0.895
BF49_3245
Nucleosidediphosphatesugar epimerases.
       0.567
BF49_3246
Hypothetical protein.
       0.567
BF49_1301
TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
     
  0.564
BF49_0849
TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
     
  0.562
BF49_1295
TRAP transporter solute receptor unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
     
  0.560
BF49_6997
Predicted gluconate TRAP family transporter DctM subunit.
 
  
 0.542
BF49_4354
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
  
  
  0.540
BF49_6994
TRAP dicarboxylate transporter DctM subunit unknown substrate 5.
  
  
  0.492
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.