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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3249Putative peptidase M23M37 family. (687 aa)    
Predicted Functional Partners:
BF49_1585
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
  
   
 0.671
BF49_0741
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
 
   
 0.661
BF49_7276
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
  
   
 0.638
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
  
 0.615
BF49_6515
Signal peptidase I EC 342189.
 
  
 0.612
BF49_0425
Periplasmic septal ring factor with murein hydrolase activity EnvCYibP.
 
   
 0.608
BF49_6539
FIG00441513 hypothetical protein.
  
     0.569
BF49_0631
Putative Zndependent protease.
  
     0.564
BF49_3260
Chorismate mutase I EC 54995.
  
    0.556
BF49_6514
Signal peptidase I EC 342189; Belongs to the peptidase S26 family.
 
  
 0.548
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.