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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3285Electron transfer flavoprotein alpha subunit. (314 aa)    
Predicted Functional Partners:
BF49_3286
Electron transfer flavoprotein beta subunit.
 0.999
BF49_2267
Electron transfer flavoproteinubiquinone oxidoreductase EC 1551; Accepts electrons from ETF and reduces ubiquinone.
 
 0.998
BF49_7206
ButyrylCoA dehydrogenase EC 13992.
 0.910
BF49_3530
ButyrylCoA dehydrogenase EC 13992.
 0.906
BF49_3679
ButyrylCoA dehydrogenase EC 13992.
 0.893
BF49_7097
IsovalerylCoA dehydrogenase EC 1384 AcylCoA dehydrogenase shortchain specific EC 1381.
 0.893
BF49_7204
CitronellylCoA dehydrogenase.
 0.893
BF49_6759
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.886
BF49_2069
AcylCoA dehydrogenase EC 1387.
 
 0.880
BF49_7166
AcylCoA dehydrogenase family protein.
 0.880
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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