STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3292Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)    
Predicted Functional Partners:
BF49_5765
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.715
BF49_1910
Chromosome initiation inhibitor; Belongs to the LysR transcriptional regulatory family.
  
     0.702
BF49_5095
Aromatic hydrocarbon utilization transcriptional regulator CatR LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.702
BF49_1275
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.698
BF49_2774
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.698
BF49_4435
LysR family transcriptional regulator YbhD; Belongs to the LysR transcriptional regulatory family.
  
     0.660
BF49_4324
LysRfamily transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.629
BF49_0061
Hydrogen peroxideinducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.561
BF49_3293
Dioxygenases related to 2nitropropane dioxygenase.
       0.558
BF49_6671
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.540
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.