STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3295LongchainfattyacidCoA ligase EC 6213. (502 aa)    
Predicted Functional Partners:
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 0.962
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
 
0.867
BF49_6971
Hypothetical protein.
  
 0.841
BF49_5686
LongchainfattyacidCoA ligase EC 6213.
 
 
 0.744
BF49_4066
LongchainfattyacidCoA ligase EC 6213.
 
 
0.743
BF49_3210
LongchainfattyacidCoA ligase EC 6213.
  
     0.735
BF49_3294
COGs COG0683.
       0.715
BF49_2373
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 0.709
BF49_3997
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; EnoylCoA hydratase isoleucine degradation EC 42117 3hydroxyacylCoA dehydrogenase EC 11135 3hydroxybutyrylCoA epimerase EC 5123.
  
 0.709
BF49_4171
3-hydroxyacyl-CoA dehydrogenase; EnoylCoA hydratase EC 42117 Delta3cisdelta2transenoylCoA isomerase EC 5338 3hydroxyacylCoA dehydrogenase EC 11135; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.709
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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