Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3296Hypothetical protein. (90 aa)    
Predicted Functional Partners:
BF49_3297
FIG00803871 hypothetical protein.
  
    0.784
BF49_4762
Glycogen debranching enzyme EC 321; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.523
BF49_4882
Glycogen debranching enzyme EC 321; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.523
glgA
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.521
glgA-2
Glycogen synthase ADPglucose transglucosylase EC 24121; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.521
BF49_4884
Trehalose synthase EC 549916.
   
    0.506
BF49_3295
LongchainfattyacidCoA ligase EC 6213.
       0.422
BF49_4617
14alphaglucan branching enzyme EC 24118.
   
  
 0.418
BF49_4764
Maltooligosyltrehalose trehalohydrolase EC 321141.
   
  
 0.418
BF49_4881
Maltooligosyltrehalose trehalohydrolase EC 321141.
   
  
 0.418
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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