STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3301Dodecin COG3360 Flavinbinding. (73 aa)    
Predicted Functional Partners:
BF49_4273
Conserved hypothetical protein hypothetical UPF0337 protein; Belongs to the UPF0337 (CsbD) family.
   
    0.753
BF49_2393
FIG00441768 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
   
    0.597
BF49_3886
UPF0337 protein blr1496; Belongs to the UPF0337 (CsbD) family.
   
    0.597
BF49_1160
Protein of unknown function DUF1428.
   
    0.571
BF49_5107
Bsl6560 hypothetical protein.
   
  
 0.550
BF49_5929
FIG01006708 hypothetical protein.
   
  
 0.550
BF49_5560
Inosine5monophosphate dehydrogenase EC 111205.
  
    0.546
BF49_0490
Possible asmA protein precursor.
   
    0.514
BF49_4439
AsmA family protein.
   
    0.514
BF49_5138
TolA protein.
   
    0.514
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.