STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3304Oligopeptide transport system permease protein OppB TC 3A151; Belongs to the ABC transporter superfamily. (331 aa)    
Predicted Functional Partners:
BF49_3305
Oligopeptide transport system permease protein OppC TC 3A151.
 0.985
BF49_3306
Oligopeptide transport system permease protein OppB TC 3A151.
 
 0.961
BF49_3303
Oligopeptide transport ATPbinding protein OppF TC 3A151; Belongs to the ABC transporter superfamily.
 
 
0.957
BF49_6662
Dipeptide transport system permease protein DppC TC 3A152.
 0.926
BF49_4042
Putative polyamine transporter Oligopeptide transport system permease protein OppC TC 3A151.
 0.918
BF49_7196
Dipeptide transport system permease protein DppC TC 3A152.
 0.906
BF49_4938
Oligopeptide transport system permease protein OppC TC 3A151.
 0.900
BF49_6956
Cell processes transport of small molecules amino acids amines peptides.
 0.891
BF49_1829
Putative glutathione transporter permease component.
 0.884
BF49_3307
Oligopeptide ABC transporter periplasmic oligopeptidebinding protein OppA TC 3A151.
  
 0.884
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.