Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3310FIG01004869 hypothetical protein. (356 aa)    
Predicted Functional Partners:
BF49_1748
FIG00440295 hypothetical protein.
  
     0.750
BF49_6641
Bll4915 protein.
 
     0.730
BF49_3309
Periplasmic serine endoprotease.
       0.688
BF49_3250
InterPro IPR001258.
  
     0.678
BF49_3252
InterPro IPR001258.
  
     0.676
BF49_1848
FIG00442018 hypothetical protein.
 
    0.665
BF49_0985
Fatty acid desaturase family protein.
  
     0.664
BF49_3251
InterPro IPR001258.
  
     0.631
BF49_6409
FIG00443059 hypothetical protein.
  
 
 0.620
BF49_3904
Blr0101 hypothetical protein.
  
    0.590
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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