STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3319Bll1341 hypothetical protein. (361 aa)    
Predicted Functional Partners:
BF49_3318
FIG00852701 hypothetical protein.
       0.537
BF49_5159
Tricarboxylate transport protein TctB.
 
    0.537
BF49_5635
Tricarboxylate transport protein TctB.
 
    0.516
BF49_0680
Tricarboxylate transport protein TctB.
  
    0.449
BF49_1640
Tricarboxylate transport protein TctB.
  
    0.449
BF49_3263
FIG00439845 hypothetical protein.
  
     0.445
BF49_6910
Transporter.
  
     0.437
BF49_6431
FIG00440573 hypothetical protein.
  
     0.429
BF49_3317
FIG00441143 hypothetical protein.
       0.427
BF49_6432
Bll5137 protein.
  
     0.425
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.