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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3343DalanylDalanine carboxypeptidase EC 34164; Belongs to the peptidase S11 family. (482 aa)    
Predicted Functional Partners:
BF49_5047
Cell division protein FtsI Peptidoglycan synthetase EC 241129.
 
 
 0.748
BF49_5053
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.724
tig
Cell division trigger factor EC 5218; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.666
BF49_5049
UDPNacetylmuramoylalanylDglutamyl26 diaminopimelateDalanylDalanine ligase EC 63210.
 
 
 0.615
BF49_3342
Hypothetical protein.
       0.572
BF49_0231
Cell division protein FtsK.
 
   
 0.536
mraY
PhosphoNacetylmuramoylpentapeptide transferase EC 27813; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
 
 0.536
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase EC 242; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
 
 0.531
BF49_4958
Bll6688 protein.
 
  
 0.520
BF49_5013
InterPro IPR005490 COGs COG1376.
 
  
 0.520
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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