Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_3343DalanylDalanine carboxypeptidase EC 34164; Belongs to the peptidase S11 family. (482 aa)    
Predicted Functional Partners:
BF49_5047
Cell division protein FtsI Peptidoglycan synthetase EC 241129.
 
 
 0.784
BF49_5053
Cell division protein FtsW; Belongs to the SEDS family.
 
 
 0.712
tig
Cell division trigger factor EC 5218; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.667
BF49_5013
InterPro IPR005490 COGs COG1376.
 
  
 0.598
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase EC 242; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
 
 0.594
BF49_4958
Bll6688 protein.
 
  
 0.593
BF49_0266
FIG01004772 hypothetical protein.
 
  
 0.592
BF49_2676
FIG00445811 hypothetical protein.
 
  
 0.587
BF49_0741
Multimodular transpeptidasetransglycosylase EC 241129 EC 34.
     
 0.583
BF49_5049
UDPNacetylmuramoylalanylDglutamyl26 diaminopimelateDalanylDalanine ligase EC 63210.
 
 
 0.582
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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