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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBHomoserine kinase EC 27139; Belongs to the pseudomonas-type ThrB family. (327 aa)    
Predicted Functional Partners:
BF49_0689
Homoserine dehydrogenase EC 1113.
 
  
 0.994
BF49_4018
Threonine synthase EC 4231.
    
 0.991
BF49_6765
Threonine synthase EC 4231.
    
 0.991
BF49_2764
Threonine synthase EC 4231.
    
 0.947
BF49_7070
Cystathionine betalyase EC 4418.
     
  0.875
BF49_4190
5methyltetrahydrofolatehomocysteine methyltransferase EC 21113; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.820
BF49_0550
Branchedchain amino acid aminotransferase EC 26142.
     
 0.815
BF49_2993
Branchedchain amino acid aminotransferase EC 26142.
     
 0.815
BF49_5698
Bll5948 hypothetical protein.
     
 0.808
BF49_6044
5methyltetrahydropteroyltriglutamate homocysteine methyltransferase EC 21114.
     
 0.808
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.