STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3383Tryptophanrich sensory protein. (131 aa)    
Predicted Functional Partners:
BF49_6316
Deoxyribodipyrimidine photolyase EC 41993; Belongs to the DNA photolyase family.
 
  
 0.761
BF49_3384
Hypothetical protein.
       0.575
BF49_5072
Phytoene dehydrogenase EC 11499.
  
  
 0.440
BF49_3386
COG2907 Amine oxidase flavincontaining.
 
     0.437
BF49_5294
FIG00801094 hypothetical protein.
   
    0.434
BF49_3385
FIG005069 Hypothetical protein.
       0.406
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.