STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3386COG2907 Amine oxidase flavincontaining. (437 aa)    
Predicted Functional Partners:
BF49_3388
Cyclopropane-fatty-acyl-phospholipid synthase; SadenosylLmethionine dependent methyltransferase similar to cyclopropanefattyacylphospholipid synthase.
 
 0.995
BF49_0995
Cyclopropanefattyacylphospholipid synthase EC 21179.
 
 0.976
BF49_3387
Hypothetical protein COG3496.
 
  
 0.952
BF49_3385
FIG005069 Hypothetical protein.
     0.936
BF49_3380
Putative transcriptional activator ChrR.
 
  
 0.879
BF49_4289
Cyclopropanefattyacylphospholipid synthaselike protein clusters with FIG005069.
 
 
 0.879
ctaG
Cytochrome oxidase biogenesis protein Cox11CtaG copper delivery to Cox1; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
      0.871
BF49_6316
Deoxyribodipyrimidine photolyase EC 41993; Belongs to the DNA photolyase family.
 
   
 0.705
BF49_3384
Hypothetical protein.
 
     0.656
BF49_3379
RNA polymerase sigma70 factor ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.528
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.