STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3392Arsenate reductase EC 12041; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (160 aa)    
Predicted Functional Partners:
BF49_3393
FIG01005162 hypothetical protein; Belongs to the UPF0262 family.
     0.979
hisD
Histidinol dehydrogenase EC 11123; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.801
BF49_7181
FIG00442914 hypothetical protein.
  
 
 0.669
BF49_1604
Arsenate reductase EC 12041; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
     0.658
BF49_0088
FIG149041 Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.635
BF49_0250
FIG000875 Thioredoxin domaincontaining protein ECYbbN.
  
 
 0.635
BF49_5864
Thioredoxin.
  
 
 0.635
BF49_6971
Hypothetical protein.
  
 
 0.577
truA
tRNA pseudouridine synthase A EC 42170; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
   0.574
BF49_6452
Arsenical pumpdriving ATPase EC 36316; Anion-transporting ATPase; Belongs to the arsA ATPase family.
    
 0.570
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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