STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3395FIG00450379 hypothetical protein. (145 aa)    
Predicted Functional Partners:
hisS
HistidyltRNA synthetase EC 61121.
  
     0.750
BF49_2234
COG1896 Predicted hydrolases of HD superfamily.
  
     0.704
BF49_7281
Sensor histidine kinase PrrB RegB EC 273.
  
     0.684
BF49_0393
FIG00450577 hypothetical protein.
  
     0.683
BF49_0264
Hypothetical protein.
  
     0.660
BF49_0276
FIG000868 Homolog of E coli HemY protein.
  
     0.646
BF49_3472
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
  
     0.639
BF49_1617
FIG00442207 hypothetical protein.
  
     0.638
BF49_4282
FIG00480696 hypothetical protein.
  
     0.627
BF49_7282
Dna binding response regulator PrrA RegA.
  
     0.610
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.