STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3395FIG00450379 hypothetical protein. (145 aa)    
Predicted Functional Partners:
hisS
HistidyltRNA synthetase EC 61121.
  
     0.750
BF49_3393
FIG01005162 hypothetical protein; Belongs to the UPF0262 family.
 
     0.708
BF49_2234
COG1896 Predicted hydrolases of HD superfamily.
  
     0.704
BF49_7281
Sensor histidine kinase PrrB RegB EC 273.
  
     0.684
BF49_0393
FIG00450577 hypothetical protein.
  
     0.683
hisD
Histidinol dehydrogenase EC 11123; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.662
BF49_0264
Hypothetical protein.
  
     0.660
BF49_3392
Arsenate reductase EC 12041; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.660
BF49_0276
FIG000868 Homolog of E coli HemY protein.
  
     0.646
BF49_3472
Chemotaxis regulator transmits chemoreceptor signals to flagelllar motor components CheY.
  
     0.639
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.