STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3397Probable oxidoreductaseShortchain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (312 aa)    
Predicted Functional Partners:
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.783
BF49_2686
Osuccinylbenzoic acidCoA ligase EC 62126.
  
 0.766
BF49_6971
Hypothetical protein.
  
 0.757
BF49_3396
FIG01009158 hypothetical protein.
  
  0.738
BF49_3398
Transcriptional regulator TetR family.
 
     0.676
BF49_5306
TPR repeat.
  
 0.659
BF49_1708
Ferredoxin reductase.
 
 
 0.524
BF49_4890
Gluconokinase EC 27112.
    
 0.513
BF49_3395
FIG00450379 hypothetical protein.
       0.509
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.486
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.