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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_34132hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168. (286 aa)    
Predicted Functional Partners:
BF49_3412
2oxohepta3ene17dioic acid hydratase EC 42.
 
 
 0.891
BF49_0469
Demethylmenaquinone methyltransferase.
    
 0.890
BF49_1723
5carboxymethyl2hydroxymuconate deltaisomerase EC 53310.
 
 
 0.725
BF49_3411
Hypothetical protein.
  
    0.714
BF49_3410
Putative 2pyrone46dicarboxylic acid hydrolase.
       0.689
hmgA
Homogentisate 12dioxygenase EC 113115; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
 
 0.667
BF49_3414
Nitrilotriacetate monooxygenase component B EC 11413.
  
    0.653
BF49_3415
Tricarboxylate transport protein TctC.
       0.646
BF49_2116
34dihydroxyphenylacetate 23dioxygenase EC 1131115.
 
  
 0.519
BF49_1722
2oxohepta3ene17dioic acid hydratase EC 42.
 
 
 0.508
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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