STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3415Tricarboxylate transport protein TctC. (321 aa)    
Predicted Functional Partners:
BF49_1641
Tricarboxylate transport membrane protein TctA.
 
 
 0.891
BF49_5160
Tricarboxylate transport membrane protein TctA.
 
 
 0.891
BF49_0679
Tricarboxylate transport membrane protein TctA.
 
 
 0.890
BF49_5636
Tricarboxylate transport membrane protein TctA.
 
 
 0.890
BF49_3414
Nitrilotriacetate monooxygenase component B EC 11413.
       0.792
BF49_5159
Tricarboxylate transport protein TctB.
 
 
 0.690
BF49_3413
2hydroxyhepta24diene17dioate isomerase EC 533 5carboxymethyl2oxohex3 ene17dioate decarboxylase EC 41168.
       0.646
BF49_3412
2oxohepta3ene17dioic acid hydratase EC 42.
       0.645
BF49_3410
Putative 2pyrone46dicarboxylic acid hydrolase.
    
  0.613
BF49_3416
Transcriptional regulator IclR family.
 
    0.613
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.