Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BF49_3419Mll0539 protein. (203 aa)    
Predicted Functional Partners:
BF49_3422
Phosphonates transport ATPbinding protein PhnL.
       0.782
phnN
ATPbinding protein PhnN Guanylate kinase EC 2748; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
       0.756
BF49_3421
Metaldependent hydrolase involved in phosphonate metabolism.
       0.756
BF49_0820
Pyridoxal kinase EC 27135; Belongs to the pyridoxine kinase family.
  
  
  0.721
BF49_3423
Phosphonates transport ATPbinding protein PhnK.
       0.704
BF49_3424
PhnJ protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
       0.704
BF49_3425
PhnI protein.
       0.704
BF49_3426
PhnH protein.
       0.704
BF49_3427
PhnG protein.
       0.704
pdxJ
Pyridoxine 5phosphate synthase EC 26992; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
     
  0.600
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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