STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3435Protein RcsF. (233 aa)    
Predicted Functional Partners:
BF49_3433
Chloramphenicol acetyltransferase EC 23128.
 
     0.949
BF49_3434
Metaldependent hydrolase involved in phosphonate metabolism.
 
     0.945
BF49_3424
PhnJ protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
  0.934
BF49_3425
PhnI protein.
 
  
  0.934
phnN
ATPbinding protein PhnN Guanylate kinase EC 2748; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
  0.911
BF49_3426
PhnH protein.
 
  
  0.908
BF49_3421
Metaldependent hydrolase involved in phosphonate metabolism.
 
     0.853
BF49_3422
Phosphonates transport ATPbinding protein PhnL.
 
     0.846
BF49_3423
Phosphonates transport ATPbinding protein PhnK.
 
     0.815
BF49_3427
PhnG protein.
 
     0.813
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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