Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BF49_3454Betalactamase class C and other penicillin binding proteins. (519 aa)    
Predicted Functional Partners:
BF49_6104
Betalactamase class C and other penicillin binding proteins.
  
     0.420
BF49_0014
Transcriptional regulatory protein.
  
     0.416
BF49_7339
Transcriptional regulatory protein.
  
     0.416
BF49_6553
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.414
BF49_5938
Betalactamase class C and other penicillin binding proteins.
  
     0.410
BF49_1041
Betalactamase class C and other penicillin binding proteins.
  
     0.407
BF49_6127
Putative beta lactamase family protein EC34164.
  
     0.402
Your Current Organism:
Bradyrhizobium sp.
NCBI taxonomy Id: 376
Other names: B. sp.
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